mummer

Generate an interactive dot plot from mummer or minimap alignments

MUM&Co uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation

Generate interactive dotplot from mummer4 output using plotly

Rapid identification of Staphylococcus aureus agr locus type and agr operon variants.

Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array

Panlineal is capable of generating Vgs from multiple genome alignments in form of lineal pan-genome. Combining short reads data, it can also detect the the allelism conduced by PAVs combinations of vast samples in a species.

Python3 module for running MUMmer and reading the output

Bioinformatics tool for multiplex PCR primer cross-reactivity analysis and exhaustive unintended amplicon detection across all possible primer combinations.

Converter Nucmer delta to bam

Reference-order genome assembly contigs from MUMmer alignments.

List of programs that facilitate extraction and processing of MUMmer data

Manage client portfolios, risk metrics, and retirement goals in a central web-based wealth management dashboard.